CDS

Accession Number TCMCG006C01281
gbkey CDS
Protein Id XP_022575359.1
Location complement(join(26205043..26205295,26205530..26205820,26205913..26206720,26206790..26207045,26207115..26208322,26208394..26209087))
Gene LOC106452081
GeneID 106452081
Organism Brassica napus

Protein

Length 1169aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_022719638.1
Definition phytochrome B isoform X2 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category K
Description Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
KEGG_ko ko:K12121        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04712        [VIEW IN KEGG]
map04712        [VIEW IN KEGG]
GOs GO:0001101        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003682        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006066        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006714        [VIEW IN EMBL-EBI]
GO:0006720        [VIEW IN EMBL-EBI]
GO:0006721        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006833        [VIEW IN EMBL-EBI]
GO:0006873        [VIEW IN EMBL-EBI]
GO:0006874        [VIEW IN EMBL-EBI]
GO:0006875        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007602        [VIEW IN EMBL-EBI]
GO:0007623        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009266        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009409        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009581        [VIEW IN EMBL-EBI]
GO:0009582        [VIEW IN EMBL-EBI]
GO:0009583        [VIEW IN EMBL-EBI]
GO:0009585        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009606        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009629        [VIEW IN EMBL-EBI]
GO:0009630        [VIEW IN EMBL-EBI]
GO:0009637        [VIEW IN EMBL-EBI]
GO:0009638        [VIEW IN EMBL-EBI]
GO:0009639        [VIEW IN EMBL-EBI]
GO:0009640        [VIEW IN EMBL-EBI]
GO:0009642        [VIEW IN EMBL-EBI]
GO:0009645        [VIEW IN EMBL-EBI]
GO:0009649        [VIEW IN EMBL-EBI]
GO:0009687        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009753        [VIEW IN EMBL-EBI]
GO:0009755        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009867        [VIEW IN EMBL-EBI]
GO:0009881        [VIEW IN EMBL-EBI]
GO:0009883        [VIEW IN EMBL-EBI]
GO:0009888        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010017        [VIEW IN EMBL-EBI]
GO:0010018        [VIEW IN EMBL-EBI]
GO:0010029        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010114        [VIEW IN EMBL-EBI]
GO:0010148        [VIEW IN EMBL-EBI]
GO:0010161        [VIEW IN EMBL-EBI]
GO:0010202        [VIEW IN EMBL-EBI]
GO:0010218        [VIEW IN EMBL-EBI]
GO:0010244        [VIEW IN EMBL-EBI]
GO:0010374        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010617        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0015979        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0017006        [VIEW IN EMBL-EBI]
GO:0017007        [VIEW IN EMBL-EBI]
GO:0017012        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019725        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0030003        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031347        [VIEW IN EMBL-EBI]
GO:0031516        [VIEW IN EMBL-EBI]
GO:0031517        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032787        [VIEW IN EMBL-EBI]
GO:0032870        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0038023        [VIEW IN EMBL-EBI]
GO:0042044        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042592        [VIEW IN EMBL-EBI]
GO:0042752        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0042803        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043288        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0043565        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044255        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045892        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0046983        [VIEW IN EMBL-EBI]
GO:0048511        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048580        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048878        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050801        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051480        [VIEW IN EMBL-EBI]
GO:0051606        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055065        [VIEW IN EMBL-EBI]
GO:0055074        [VIEW IN EMBL-EBI]
GO:0055080        [VIEW IN EMBL-EBI]
GO:0055082        [VIEW IN EMBL-EBI]
GO:0060089        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0071214        [VIEW IN EMBL-EBI]
GO:0071229        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071395        [VIEW IN EMBL-EBI]
GO:0071478        [VIEW IN EMBL-EBI]
GO:0071482        [VIEW IN EMBL-EBI]
GO:0071489        [VIEW IN EMBL-EBI]
GO:0071490        [VIEW IN EMBL-EBI]
GO:0071491        [VIEW IN EMBL-EBI]
GO:0071495        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0072503        [VIEW IN EMBL-EBI]
GO:0072507        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0080134        [VIEW IN EMBL-EBI]
GO:0090558        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0098771        [VIEW IN EMBL-EBI]
GO:0104004        [VIEW IN EMBL-EBI]
GO:1900140        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901615        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1901701        [VIEW IN EMBL-EBI]
GO:1902644        [VIEW IN EMBL-EBI]
GO:1902679        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903507        [VIEW IN EMBL-EBI]
GO:1990841        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]
GO:2000028        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]
GO:2000241        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGTTTCCGGAGTCGGCGGCGGCGGAGGAAGCGGCGGGAGTGGCCGCGGCGGCGGCCGCGGCGGAGAAGAATCCTCGTCAACTCACCGGAGAGAACAAGCTCAATCCTCAGGTACGAAGTCTCTCAGGCCACAGAGCCAACCACAAACGGAATCAATTAGCAAAGCTATTCAGCAATACACAGTCGACGCTCGACTCCACGCCGTCTTCGAACAATCCGGCGAGTCAGGAAGATCCTTCGACTACTCGCAATCCCTCAAAACGACGACGTACGGCTCCTCGGTCCCGGAGCAGCAGATCACGGCCTACCTCTCCAGGATCCAGCGCGGCGGCTACATCCAGCCGTTCGGATGCATGATCGCCGTCGACGAGTCCACCTTCGCCATCATCGGCTACAGCGAGAACGCGCGGGAAATGCTCGGCCTCACGCCCCAGTCCGTCCCCAGCCTCGAGAGGCCCGAGATTCTCGCCATGGGGACCGACGTCCGCTCCCTCTTCACCTCCTCCAGCTCGGTCCTCCTCGAACGCGCCTTCGTGGCGCGTGAGATCACGCTCCTGAATCCCGTTTGGATCCACTCCAAGTACACTGGGAAGCCGTTTTACGCTATCTTACACAGGATCGACGTTGGAGTCGTGATCGATTTGGAGCCGGCGAGGACTGAGGATCCAGCGCTTTCCATCGCCGGAGCGGTTCAGTCTCAGAAGCTAGCCGTTCGCGCTATCTCGCAGTTACAGTCTCTCCCCGGTGGAGATATCAAGCTGCTTTGTGATACGGTTGTGGAGAGTGTGAGGGACTTAACCGGATACGACCGTGTGATGGTGTACAAGTTTCACGAAGACGAGCATGGAGAGGTTGTTGCGGAGAGTAGGAGAGAGGATTTGGAGCCTTACATTGGTTTGCATTATCCAGCTACTGATATTCCACAAGCGTCACGGTTCTTGTTTAAGCAGAATCGAGTGCGTATGATTGTTGATTGCCACGCGACGCCGGTTCTCGTGGTGCAAGACGATAGGCTGACTCAGTCTATGTGCTTGGTTGGGTCTACTTTGAGAGCTCCTCACGGTTGTCACTCTCAGTATATGGCGAATATGGGGTCTATCGCGTCTTTAGCGATGGCGGTTATAATAAACGGGAGTGAAGAAGATGGGAGTAGTGTCGCTGGTGGGAGAAGCGCTATGAGGCTTTGGGGTTTAGTCGTTTGCCATCATACTTCTTCTCGATGCATACCGTTTCCGTTGAGGTATGCTTGCGAGTTTTTGATGCAGGCGTTTGGTTTACAGTTGAACATGGAGTTGCAGTTGGCTTTGCAGATGTCGGAGAAACGCGTTTTGAGGACGCAGACGCTGTTGTGCGATATGCTTCTGCGTGACTCGCCTGCTGGGATTGTTACGCAGAGTCCTAGTATCATGGACTTGGTGAAATGTGACGGTGCAGCGTTTCTTTACCACGGGAATTATTACCCGTTGGGTGTTGCTCCGACGGAAGCTCAGATTAAAGACGTTGTGGAGTGGTTGCTTGCGAATCACGCTGATTCAACTGGTTTAAGCACTGATAGTTTAGGGGACGCAGGTTATCCCGGAGCAGCTGCGTTAGGGGATGCTGTGTGCGGTATGGCGGTTGCGTATATCACAAAAAGAGATTTCCTTTTCTGGTTTCGTTCTCATACAGCTAAAGAGATCAAATGGGGAGGCGCTAAGCATCATCCAGAGGACAAAGATGATGGGCAAAGGATGCATCCTCGCTCTTCTTTCAAGGCTTTTCTTGAAGTTGTTAAGAGTCGGAGTCAGCCGTGGGAAACTGCGGAAATGGATGCGATTCATTCGCTCCAGCTGATTCTAAGGGACTCTTTTAAGGAATCTGAGGCAGCTATGAACTCGAAAACTGCAGATGGCGCGGTTCAGCCTTATAGTATGGCAGGAGAGCAGGGGATTGATGAGTTAGGTGCTGTTGCAAGAGAGATGGTTAGACTCATCGAGACAGCAACGGTGCCTATATTCGCTGTGGATGCTGGAGGATGCATCAATGGATGGAACGCTAAGATTGCAGAGTTGACCGGTCTCTCGGTTGAAGAAGCTATGGGGAAGTCTCTGGTTTCTGATCTGATATACAAAGAGAATGAAGAAACTGTTGATAAGCTCATTTCTCGTGCGCTCAGAGGGGACGAGGACAAGAATGTGGAGATAAAGCTGAAAACTTTCAGCCCTGAACTACAAGGGAAAGCGGTTTTTGTGGTTGTGAATGCATGTTCGAGCAAGGACTACTCAAACAACATTGTTGGCGTCTGTTTTGTGGGACAGGATGTTACTGGTCAGAAAATCGTAATGGACAAGTTCATCAACATACAAGGAGACTACAAAGCCATTGTCCATAGCCCAAACCCACTGATTCCACCAATCTTTGCGGCGGACGAGAACACGTGCTGCCTGGAGTGGAACACCGCATTGGAAAAGCTCACTGGTTGGTCTCGCAGTGAAGTGATTGGGAAAATGCTTGTTGGGGAAGTGTTTGGGAGCTGTTGCAGGCTAAAGGGTCCTGATGCATTAACCAAGTTCATGATTGTGTTGCATAATGCGATCGGTGGCCAAGAAACAGACAAGTTCCCTTTCCCATTCTTTGACCGCAACGGGAAGTTTGTTCAGGCTCTACTGACTGCAAACAAGCGTGTAAGCTTCGATGGAAAGGTTATTGGGGCTTTCTGTTTCTTGCAGATCCCGAGTCCTGAGCTGCAGCAAGCTTTAGCAGTTCAACGAAGGCAGGACACAGAGTGTTTCACGAAGGCGAAAGAGCTAGCTTACATTTGTCAGGTGGTAAAGAATCCTTTGAGCGGTTTGCGTTTCACAAACTCGTTGTTGGAAGCTACAGACTTGAACGAGGATCAGAAACAGCTTCTTGAAACAAGTGTTTCTTGCGAGAAACAGATTTCCAGGATTGTCAGTGACATGGATCTTGAAAGAATTGAAGACGGTTCGTTTGAGCTAGTTAGAACGGAGTTTTTACTCGGAAGTGTCATCAACGCGATTGTAAGCCAGGCGATGTTCTTATTAAAGGAGAGAGGTGTTCAGCTGATCCGTGACATTCCTGAAGAGATCAAATCTATACAAGTTTATGGAGACCAGACAAGGATTCAACAGCTCCTAGCTGAGTTTCTGCTGAGTATAATCCGGTATGCACCGTCCCATGAGTGGGTGGAGATCCATATAAGCCATGTTCCGAAGCAAATGGCTGATGGATTCTACGCTATTCGCACAGAATTTAGAATGGCGTGCCCAGGTGAAGGTCTGCCTCCAGAGCTAGTCCGAGACATGTTTCATAGCAGCAGGTGGACGAGCCCTGAAGGGTTAGGACTAAGCGTATGTAGAAAGATTCTAAAGATCATGAACGGTGAGGTTCAGTACATCCGAGAGTCGGAACGTTCCTATTTCCTCATCATACTCGAGCTCCCGGTGCCTATGAAACGCCCTTTGTCAACCGCTAGTGGCAGCGGAGACATGATGTTGATGATGCCATAG
Protein:  
MVSGVGGGGGSGGSGRGGGRGGEESSSTHRREQAQSSGTKSLRPQSQPQTESISKAIQQYTVDARLHAVFEQSGESGRSFDYSQSLKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESTFAIIGYSENAREMLGLTPQSVPSLERPEILAMGTDVRSLFTSSSSVLLERAFVAREITLLNPVWIHSKYTGKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESRREDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGSEEDGSSVAGGRSAMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGNYYPLGVAPTEAQIKDVVEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKTADGAVQPYSMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVEEAMGKSLVSDLIYKENEETVDKLISRALRGDEDKNVEIKLKTFSPELQGKAVFVVVNACSSKDYSNNIVGVCFVGQDVTGQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCLEWNTALEKLTGWSRSEVIGKMLVGEVFGSCCRLKGPDALTKFMIVLHNAIGGQETDKFPFPFFDRNGKFVQALLTANKRVSFDGKVIGAFCFLQIPSPELQQALAVQRRQDTECFTKAKELAYICQVVKNPLSGLRFTNSLLEATDLNEDQKQLLETSVSCEKQISRIVSDMDLERIEDGSFELVRTEFLLGSVINAIVSQAMFLLKERGVQLIRDIPEEIKSIQVYGDQTRIQQLLAEFLLSIIRYAPSHEWVEIHISHVPKQMADGFYAIRTEFRMACPGEGLPPELVRDMFHSSRWTSPEGLGLSVCRKILKIMNGEVQYIRESERSYFLIILELPVPMKRPLSTASGSGDMMLMMP